A family of molecular switches based on the indanylidene–pyrroline (IP) framework is designed to mimic the photoisomerization in retinal proteins. The IP framework can also be regarded as a conformationally locked derivative of the retinal protonated Schiff base. The relevant features of these systems are:
- the indanylidene and pyrroline units are conformationally rigid and connected by a single exocyclic double bond.
- the indanylidene can be functionalized with protected carboxyl and amino groups at the same quaternary carbon. This allows the switch to be integrated in a protein backbone.
- the pyrroline unit can host a permanent zwitterion with a dipole moment orthogonal to the double bond. Hence, it can be used as an effective dipole moment switc
The main design principles for a molecular switch are:
- Efficient energy funneling into the isomerization mode vibrational coherence
- Photochromism
- Unidirectional isomerization (chirality)
Recently, we have studied the origin of the 1. principle, namely the vibrational coherence. For this purpose we have used nonadiabatic QM/MM molecular dynamics simulations. Based on these simulations we have identified a double-bond rotation coupled to ring inversion that induced a periodic modulation of the overlap of the pi-orbitals. The video below shows one QM/MM trajectory of a successful isomerization.
switch.mp4 | 1.81 MB |